Playing a custom modpack I noticed when I tried recipe filling into the Simple Storage Network crafting interface, the items would be misplaced or moved into different positions

I worked my way through the mods and emi ended up being the one causing the issue
Issue still happens with jei and emi alone in a aswell

I found the same issue for RFTools Storage's storage scanner, and Integrated Terminals's storage terminal, and be careful because I also discovered its not only failing to place them properly, but also deleting the first item in the crafting grid from your inventory/storage, so odds are decent after this video you are down 1 Diamond, 1 Gold Ingot, and 1 Raw Iron.

While these mods are making mistakes themselves, I've resolved the issue on EMI's side and filling should work as expected.