Bee Receptacle is used in recipes as dye* and dropHoney.
Mutagen Tank is used in recipes as beeComb.

Minecraft 1.6.4, Gendustry v1.1.3.78

Huh that's odd. Can you verify that you don't have item id conflicts and upload your full log?

I have no ID conflicts...
But i'l try to change id's for items and answer as soon as i can.

Fixed by changing id for gendustry items.
It because of updating Gendustry (version that add new honeycomb).
That's was odd...

Please close the issue.

PS: Any chance to disable those Colored Bees?

Create an empty file in config/gendustry/overrides/bees_color.cfg - that should prevent them from being loaded.