enchantments that I have disabled still spawn in chests but when you move them to your inventory they disappear is there a way to prevent them from spawning in chests?

It's likely that the mod is injecting those items on runtime, similar to mods like artifacts and simply swords used to do (I think they still might?)

enchantments that I have disabled still spawn in chests but when you move them to your inventory they disappear is there a way to prevent them from spawning in chests?

You should be able to work around this by finding the loot table directory in a mod and using a datapack to remove it, though obviously its alot more effort. at least global datapacks exists...

edit: alternatively you can use Item Blacklist (https://modrinth.com/mod/item-blacklist) alongside this mod. that mod can remove items added through class files, but lacks the ability to remove recipes, so using both will essentially completely remove an item.