When using your mod with the bigger storage disks in the disk drive, the game crashes after placing the machine down from Equivalent Storage on top the disk drive. Not sure if its an issue on your end, or Equivalent Storage's end but here is the crash anyways.

Equivalent Storage version- 1.12.2- 1.0.2
Refined Storage version- 1.12.2- 1.6.14
Reborn Storage version- 1.12.2- 3.3.2.79

https://pastebin.com/HuC6RVki

Going to close as the issue is not with your mod, it seems its crashing from Project E.