This is with RFTools 1.1x-5.72 McJtyLib 1.1x-2.3.1, MC 1.10.2, and Forge 12.18.3.2185, Direwolf20 1.10 FTB pack.

When I install a Storage Filter Module in a Builder, in whitelist mode, all whitelisted items are successfully transferred to an attached chest but additional items are collected and transferred as well. The items that are collected, which are not whitelisted, seem to be primarily if not exclusively ores from IC2. Copper Ore 5767/1, Lead Ore 5767/2, Tin Ore 5767/3

The filter is set to blacklist but all other options are left at the default (mod, damage, oredict, etc.)

The Builder contains a Shape Card (Quarry).

Thank you for taking the time to create this issue, as we're no longer supporting versions below 1.12, I'm going to go ahead and close it but if this bug seems to continue over to newer versions, please do report it again so we can investigate the issue further.