Vanilla food pantry is an excellent mod by The_Wabbit0101 that adds a great deal of depth to food preparation. Unfortunately, while compatibility datapacks provided by The_Wabbit0101 allow Simple Farming ingredients to be used in VanillaFoodPantry recipes, the converse is not yet possible.

Off the top of my head, items such as vinegar, fried eggs, and cheese are some of the "duplicate" items between mods that behave differently. Likewise, VFP adds its own set of "Bottles" which are at odds with the vanilla Minecraft bottles that Simple Farming uses.