After crafting a vanilla Crafting Table using the intended recipe I cannot craft it using the vanilla recipe. I also cannot craft vanilla stone/wooden tools or planks the vanilla way (though I'm pretty sure the planks, at least, is intended), nor bread, nor torches. Wooden slab recipes, however, still function. Are these things intended?

Minecraft 1.15.2
Forge 31.1.18
Ages API 1.0.5
Yanny's Stone Age 1.1.4
Multiplayer Server

Edits: Many edits to include more recipes still locked as if in the stone age.

Yes, it is intended that you cannot craft these items vanilla way