Issue description:

Upgrading a logistical transporter with items inside it will drop the item in world but also keep them inside the pipe.
The item in the pipe disappears if it reaches a dead end, but will be inserted into any inventory if it finds one.

Steps to reproduce:

1. put items in logistical transporter
2. make sure there are items in it
3. upgrade by using alloys on it

Version (make sure you are on the latest version before reporting):

Forge: 32.0.108
Mekanism: Mekanism-1.16.1-10.0.9.432.jar
Other relevant version:

If a (crash)log is relevant for this issue, link it here: (It's almost always relevant)

[gist / pastebin / etc link here. Please make sure that it isn't set to expire.]

Writing this here so I don't forget to fix it when I am fixing the reported issue, but it seems that upgrading universal cables, pressurized tubes, and mechanical pipes cause the contents to be voided in most cases (at least if it is a new transmitter and hasn't had its contents saved to world).