Not sure how easy it is but would be nice to have a checkbox to not track war mode stuff.

There is already PvP filtering in ATT. Not at computer to screenshot but I believe it's in the second tab.

If you've found something that requires PvP and is not filtered by that filter, please post that specifically.

Yes I have PvP disabled

When I am in Zuldazar as alliance I see Duelers Guild stuff which requires warmode

Under the world quests section in Zuldazar is the achievement Boxing Match

I wil report more as I find them